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GEM3 is an NSF EPSCoR research program seeking to understand how genetic diversity and phenotypic plasticity affect species response to environmental change, shaping both population response and adaptive capacity.
Visit them at: https://www.idahogem3.org
We present a novel model development and evaluation framework, wherein we compare 26 models to predict upper distribution limits of trout in streams in Oregon using observational data collected in 2017. The models used machine learning, logistic...
This repo is for scripts to process and analyze data as described in Melton et al., 2023 (Plant-Environment Interactions, DOI: https://doi.org/10.1002/pei3.10119) Raw data associated with these scripts are available from NCBI SRA from BioProject...
Supplemental scripts for analyses that follow text mining using the G2PMineR R package. [v1.0.0](https://github.com/aemelton/G2PMineR_Supplemental_Scripts/releases/tag/v1.0.0) utilized within associated peer reviewed manuscript in International...
This code was used for a northern Idaho northern leopoard frog reintroduction feasability analysis. It can be quite cumbersome to run - the current version is intended to be run using parallel computing and can take several days/weeks to run. For...
Data and code files used for analyses in Indigenous caretaking of beargrass and the social and ecological consequences of adaptations to maintain beargrass weaving practices Hart-Fredeluces, G. M., M. Burnham, M. Blaich Vaughan, G. Hart, J. A....
ABM files at Jacks, Keithly/Mann, and Dry creeks to demonstrate the CDMetaPOP behavioral plasticity: habitat selection module. *Directory information*: inputs: CDMetaPOP input files for the creeks. outputs available by request, but too large for...
Code for AoB paper: "Post-fire seed dispersal of a wind-dispersed shrub declined with distance to seed source, yet had high levels of unexplained variation" This repository includes code needed to replicate the models in the paper, including the...
Data used to identify species occurring in hyperarid environments for analyses described in "Meta-analysis reveals challenges and gaps for genome-to-phenome research underpinning plant drought response." The "PlantsLackingHumanUse_PrelimQCd_Data....
This code was used for the study in: Zaiats, A., Cattau M.E., Pilliod D.S., Liu R., Requena-Mullor, J.M., Caughlin, T.T. (2023) Forecasting natural regeneration of sagebrush after wildfires using population models and spatial matching. Landscape...
This code was used for the simulation study in: Zaiats, A., Requena-Mullor, J.M., Germino, M.J., Forbey, J.S., Richardson, B.A., Caughlin, T.T. (2022) Spatial models can improve the experimental design of field-based transplant gardens by...